A scalable test suite for continuous dynamic multiobjective optimisation Journal Article
IEEE Transactions on Cybernetics, vol.1 (no.1), pp. 1–12, 2019.
Design of experiments and the virtual PCR simulator: An online game for pharmaceutical scientists and biotechnologists Journal Article
Pharmaceutical Statistics, 2019.
Isothermal folding of a light-up bio-orthogonal RNA origami nanoribbon Journal Article
Scientific Reports, 8 (1), 2018.
An Empirical Study of Dynamic Triobjective Optimisation Problems Inproceedings
CEC 2018, pp. 1–8, Rio, Brazil, 2018.
Improving microbial strain design via multiobjective optimisation and decision making Inproceedings
AI for sythetic biology 2, IJCIA, pp. 1–6, stockholm, sweden, 2018.
Benchmark Problems for CEC2018 Competition on Dynamic Multiobjective Optimisation Technical Report
Newcastle University (1), 2018.
Predicting species emergence in simulated complex pre-biotic networks Journal Article
PLOS ONE, 13 (2), pp. e0192871, 2018.
DNA origami nanorobot fiber optic genosensor to TMV Journal Article
Biosensors and Bioelectronics, 99 (C), pp. 209–215, 2018.
Less Detectable Environmental Changes in Dynamic Multiobjective Optimisation Inproceedings
GECCO, pp. 1–8, Kyoto, Japan, 2018.
SynBioHub: A Standards-Enabled Design Repository for Synthetic Biology Journal Article
ACS Synthetic Biology, 2018.
Population Dynamics of Autocatalytic Sets in a Compartmentalized Spatial World Journal Article
Life, 8 (3), pp. 33, 2018.
The fittest, the common, and the dullest: Selection dynamics of exact autocatalytic replicators Inproceedings
The 2018 Conference on Artificial Life, pp. 370–371, Tokyo, Japan, 2018.
Strain design as multiobjective network interdiction problem: A preliminary approach Inproceedings
CAEPIA 2018, pp. 1–10, Granada, Spain, 2018.
Stochastic Rate Parameter Inference Using the Cross-Entropy Method Incollection
Computational Methods in Systems Biology, pp. 146–164, Springer International Publishing, 2018.
The PCR Simulator: an on-line application for teaching Design of Experiments and the polymerase chain reaction Journal Article
bioRxiv, 415042v2 , 2018.
RGIFE: a ranked guided iterative feature elimination heuristic for the identification of biomarkers Journal Article
BMC Bioinformatics, 18 (1), 2017.
A machine learning approach for the identification of new biomarkers for knee osteoarthritis development in overweight and obese women Journal Article
Osteoarthritis and Cartilage, 2017.
Mechanisms of Connectome Development Journal Article
Trends in Cognitive Sciences, 21 (9), pp. 703–717, 2017.
Mechanisms underlying different onset patterns of focal seizures Journal Article
PLOS Computational Biology, 13 (5), pp. e1005475, 2017.
Predicting neurosurgical outcomes in focal epilepsy patients using computational modelling Journal Article
Brain, 140 (2), pp. 319–332, 2017.
Characterising the Influence of Rule-Based Knowledge Representations in Biological Knowledge Extraction from Transcriptomics Data Incollection
Applications of Evolutionary Computation, pp. 125–141, Springer International Publishing, 2017.
Designing Uniquely Addressable Bio-orthogonal Synthetic Scaffolds for DNA and RNA Origami Journal Article
ACS Synthetic Biology, 2017.
Reply: Computer models to inform epilepsy surgery strategies: prediction of postoperative outcome Journal Article
Simbiotics: A Multiscale Integrative Platform for 3D Modeling of Bacterial Populations Journal Article
ACS Synthetic Biology, 2017.
SMT-based Synthesis of Safe and Robust PID Controllers for Stochastic Hybrid Systems Incollection
Hardware and Software: Verification and Testing, pp. 131–146, Springer International Publishing, 2017.
Optimizing nucleic acid sequences for a molecular data recorder Inproceedings
Proceedings of the Genetic and Evolutionary Computation Conference on - GECCO '17, pp. 1145–1152, Berlin, Germany, 2017.
CSBB: synthetic biology research at Newcastle University Journal Article
Biochemical Society Transactions, 45 (3), pp. 781–783, 2017.
Functional networks inference from rule-based machine learning models Journal Article
BioData Mining, 9 (1), 2016.
Probabilistic Hybrid Systems Verification via SMT and Monte Carlo Techniques Incollection
Hardware and Software: Verification and Testing, pp. 152–168, Springer International Publishing, 2016.
In Vitro Implementation of a Stack Data Structure Based on DNA Strand Displacement Incollection
Unconventional Computation and Natural Computation, pp. 87–98, Springer International Publishing, 2016.