Skip to content

Publications

68 entries « 2 of 4 »

Little, Bethany; Alshabrawy, Ossama ; Stow, Daniel ; Ferrier, Nicol I; McNaney, Roisin ; Jackson, Daniel G; Ladha, Karim ; Ladha, Cassim ; Ploetz, Thomas ; Bacardit, Jaume ; Olivier, Patrick ; Gallagher, Peter ; O'Brien, John T

Deep learning-based automated speech detection as a marker of social functioning in late-life depression Journal Article

Psychological Medicine, pp. 1–10, 2020.

Links | BibTeX

Shmarov, Fedor; Soudjani, Sadegh ; Paoletti, Nicola ; Bartocci, Ezio ; Lin, Shan ; Smolka, Scott A; Zuliani, Paolo

Automated Synthesis of Safe Digital Controllers for Sampled-Data Stochastic Nonlinear Systems Journal Article

IEEE Access, 8 , pp. 180825–180843, 2020.

Links | BibTeX

Crowther, Matthew; Grozinger, Lewis ; Pocock, Matthew ; Taylor, Christopher P D; McLaughlin, James A; Mısırlı, Göksel ; Bartley, Bryan A; Beal, Jacob ; Goñi-Moreno, Angel ; Wipat, Anil

ShortBOL: A Language for Scripting Designs for Engineered Biological Systems Using Synthetic Biology Open Language (SBOL) Journal Article

ACS Synthetic Biology, 9 (4), pp. 962–966, 2020.

Links | BibTeX

Alameer, Ali; Kyriazakis, Ilias ; Dalton, Hillary A; Miller, Amy L; Bacardit, Jaume

Automatic recognition of feeding and foraging behaviour in pigs using deep learning Journal Article

Biosystems Engineering, 197 (C), pp. 91–104, 2020.

Links | BibTeX

Wipat, Anil

Communicating Structure and Function in Synthetic Biology Diagrams Journal Article

ACS Synthetic Biology, 8 (8), pp. 8, 2019.

Links | BibTeX

Hallinan, Jennifer S; Wipat, Anil ; Kitney, Richard ; Woods, Simon ; Taylor, Ken ; Goñi-Moreno, Angel

Future-proofing synthetic biology: educating the next generation Journal Article

Engineering Biology, 3 (2), pp. 25–31, 2019.

Links | BibTeX

Wade, Yana; Daniel, Richard A; Leak, David J

Heterologous microcompartment assembly in Bacillaceae: Establishing the components necessary for scaffold formation Journal Article

ACS Synthetic Biology, 8 (7), pp. 1642–1654, 2019.

Links | BibTeX

Schumacher, Julia; Peraza, Luis R; Firbank, Michael ; Thomas, Alan J; Kaiser, Marcus ; Gallagher, Peter ; O’Brien, John T; Blamire, Andrew M; Taylor, John-Paul

Dysfunctional brain dynamics and their origin in Lewy body dementia Journal Article

Brain, 142 (6), pp. 1767–1782, 2019.

Links | BibTeX

Wipat, Anil

Functional Analysis of Enzyme Families Using Residue-Residue Coevolution Similarity Networks Journal Article

Biorxiv, Preprint only (Preprint only), pp. 9, 2019.

Links | BibTeX

Jiang, Shouyong; Kaiser, Marcus ; Yang, Shengxiang ; Kollias, Stefanos ; Krasnogor, Natalio

A Scalable Test Suite for Continuous Dynamic Multiobjective Optimization Journal Article

IEEE Transactions on Cybernetics, pp. 1–13, 2019.

Links | BibTeX

Fellermann, Harold; Shirt-Ediss, Ben ; Kozyra, Jerzy ; Linsley, Matt ; Lendrem, Dennis ; Isaacs, John ; Howard, Thomas

Design of experiments and the virtual PCR simulator: An online game for pharmaceutical scientists and biotechnologists Journal Article

Pharmaceutical Statistics, 2019.

Links | BibTeX

Cowton, Jake; Kyriazakis, Ilias ; Bacardit, Jaume

Automated Individual Pig Localisation, Tracking And Behaviour Metric Extraction Using Deep Learning Journal Article

IEEE Access, pp. 1–1, 2019.

Links | BibTeX

Grozinger, Lewis; Amos, Martyn ; Gorochowski, Thomas E; Carbonell, Pablo ; Oyarzún, Diego A; Stoof, Ruud ; Fellermann, Harold ; Zuliani, Paolo ; Tas, Huseyin ; Goñi-Moreno, Angel

Pathways to cellular supremacy in biocomputing Journal Article

Nature Communications, 10 (1), 2019.

Links | BibTeX

Naylor, Jonathan; Fellermann, Harold ; Krasnogor, Natalio

Easybiotics: a GUI for 3D physical modelling of multi-species bacterial populations Journal Article

Bioinformatics, 35 (19), pp. 3859–3860, 2019.

Links | BibTeX

Goetzfried, Marisa A; Vogele, Kilian ; Mückl, Andrea ; Kaiser, Marcus ; Holland, Nolan B; Simmel, Friedrich C; Pirzer, Tobias

Periodic Operation of a Dynamic DNA Origami Structure Utilizing the Hydrophilic–Hydrophobic Phase‐Transition of Stimulus‐Sensitive Polypeptides Journal Article

Small, 15 (45), pp. 1903541, 2019.

Links | BibTeX

Sinha, Nishant; Wang, Yujiang ; Dauwels, Justin ; Kaiser, Marcus ; Thesen, Thomas ; Forsyth, Rob ; Taylor, Peter Neal

Computer modelling of connectivity change suggests epileptogenesis mechanisms in idiopathic generalised epilepsy Journal Article

NeuroImage: Clinical, 21 (C), pp. 101655, 2019.

Links | BibTeX

Beal, Jacob; Nguyen, Tramy ; Gorochowski, Thomas E; Goñi-Moreno, Angel ; Scott-Brown, James ; McLaughlin, James Alastair ; Madsen, Curtis ; Aleritsch, Benjamin ; Bartley, Bryan ; Bhakta, Shyam ; Bissell, Mike ; Hair, Sebastian Castillo ; Clancy, Kevin ; Luna, Augustin ; Novère, Nicolas Le ; Palchick, Zach ; Pocock, Matthew ; Sauro, Herbert ; Sexton, John T; Tabor, Jeffrey J; Voigt, Christopher A; Zundel, Zach ; Myers, Chris ; Wipat, Anil

Communicating Structure and Function in Synthetic Biology Diagrams Journal Article

ACS Synthetic Biology, 8 (8), pp. 1818–1825, 2019.

Links | BibTeX

Torelli, Emanuela; Kozyra, Jerzy Wieslaw ; Gu, Jing-Ying ; Stimming, Ulrich ; Piantanida, Luca ; Voïtchovsky, Kislon ; Krasnogor, Natalio

Isothermal folding of a light-up bio-orthogonal RNA origami nanoribbon Journal Article

Scientific Reports, 8 (1), 2018.

Links | BibTeX

Keasar, Chen; McGuffin, Liam J; Wallner, Björn ; Chopra, Gaurav ; Adhikari, Badri ; Bhattacharya, Debswapna ; Blake, Lauren ; Bortot, Leandro Oliveira ; Cao, Renzhi ; Dhanasekaran, B K; Dimas, Itzhel ; Faccioli, Rodrigo Antonio ; Faraggi, Eshel ; Ganzynkowicz, Robert ; Ghosh, Sambit ; Ghosh, Soma ; Giełdoń, Artur ; Golon, Lukasz ; He, Yi ; Heo, Lim ; Hou, Jie ; Khan, Main ; Khatib, Firas ; Khoury, George A; Kieslich, Chris ; Kim, David E; Krupa, Pawel ; Lee, Gyu Rie ; Li, Hongbo ; Li, Jilong ; Lipska, Agnieszka ; Liwo, Adam ; Maghrabi, Ali Hassan A; Mirdita, Milot ; Mirzaei, Shokoufeh ; Mozolewska, Magdalena A; Onel, Melis ; Ovchinnikov, Sergey ; Shah, Anand ; Shah, Utkarsh ; Sidi, Tomer ; Sieradzan, Adam K; Ślusarz, Magdalena ; Ślusarz, Rafal ; Smadbeck, James ; Tamamis, Phanourios ; Trieber, Nicholas ; Wirecki, Tomasz ; Yin, Yanping ; Zhang, Yang ; Bacardit, Jaume ; Baranowski, Maciej ; Chapman, Nicholas ; Cooper, Seth ; Defelicibus, Alexandre ; Flatten, Jeff ; Koepnick, Brian ; Popović, Zoran ; Zaborowski, Bartlomiej ; Baker, David ; Cheng, Jianlin ; Czaplewski, Cezary ; Delbem, Alexandre Cláudio Botazzo ; Floudas, Christodoulos ; Kloczkowski, Andrzej ; Ołdziej, Stanislaw ; Levitt, Michael ; Scheraga, Harold ; Seok, Chaok ; Söding, Johannes ; Vishveshwara, Saraswathi ; Xu, Dong ; Crivelli, Silvia N

An analysis and evaluation of the WeFold collaborative for protein structure prediction and its pipelines in CASP11 and CASP12 Journal Article

Scientific Reports, 8 (1), 2018.

Links | BibTeX

Fellermann, Harold; Shirt-Ediss, Ben ; Kozyra, Jerzy W; Linsley, Matthew ; Lendrem, Dennis ; Howard, Thomas

The PCR Simulator: an on-line application for teaching Design of Experiments and the polymerase chain reaction Journal Article

bioRxiv, 415042v2 , 2018.

Links | BibTeX

68 entries « 2 of 4 »